Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
| Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
| Upregulated in class | SCID |
| GeneSet | BIOCARTA_TNFR1 SIGNALING PATHWAY |
| Enrichment Score (ES) | -0.6033955 |
| Normalized Enrichment Score (NES) | -1.61946 |
| Nominal p-value | 0.012526096 |
| FDR q-value | 0.6823362 |
| FWER p-Value | 0.999 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | MAP2K4 | 1426233_at 1442679_at 1451982_at | 2090 | 1.312 | -0.0312 | No | ||
| 2 | CRADD | 1427505_a_at 1443430_at | 3924 | 0.833 | -0.0742 | No | ||
| 3 | LMNA | 1421654_a_at 1425472_a_at 1426868_x_at 1452212_at 1457670_s_at | 3954 | 0.827 | -0.0351 | No | ||
| 4 | BAG4 | 1418707_at 1439024_at 1449186_at | 11993 | -0.072 | -0.3983 | No | ||
| 5 | BIRC3 | 1421392_a_at 1425223_at | 12726 | -0.137 | -0.4250 | No | ||
| 6 | TNF | 1419607_at | 13820 | -0.238 | -0.4632 | No | ||
| 7 | LMNB1 | 1423520_at 1423521_at | 15294 | -0.394 | -0.5112 | No | ||
| 8 | RIPK1 | 1419508_at 1439273_at 1449485_at | 15871 | -0.462 | -0.5149 | No | ||
| 9 | CASP8 | 1424552_at | 16947 | -0.612 | -0.5341 | No | ||
| 10 | LMNB2 | 1451849_a_at | 18468 | -0.911 | -0.5589 | Yes | ||
| 11 | FADD | 1416888_at 1446499_at | 19092 | -1.031 | -0.5369 | Yes | ||
| 12 | CASP3 | 1426165_a_at 1430192_at 1449839_at | 19993 | -1.310 | -0.5140 | Yes | ||
| 13 | TRAF2 | 1451233_at | 20609 | -1.634 | -0.4623 | Yes | ||
| 14 | CASP2 | 1448165_at | 21150 | -2.026 | -0.3879 | Yes | ||
| 15 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 21619 | -2.690 | -0.2779 | Yes | ||
| 16 | MADD | 1425735_at 1455502_at | 21698 | -2.944 | -0.1376 | Yes | ||
| 17 | TNFRSF1A | 1417291_at | 21718 | -3.039 | 0.0099 | Yes |
